Alternate identifier:
-
Related identifier:
(Is Supplement To) 10.3389/fgene.2018.00186 - DOI
Creator/Author:
Wittenburg, Dörte https://orcid.org/0000-0002-3639-2574 [Wittenburg, Dörte]
Contributors:
-
Title:
Updated results to publication “Estimation of Recombination Rate and Maternal Linkage Disequilibrium in Half-Sibs” (Fron Genet)
Additional titles:
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Description:
(Abstract) In Hampel et al. (2018, Fron Genet), we proposed an advanced method for the estimation of paternal recombination rate and maternal linkage disequilibrium between pairs of SNPs if genotypes of paternal half sibs were available. To show practical usability of the approach, empirical bovine data comprising several half-sib families have been investigated. However, the outcome of our method strongly depended on the order of SNPs. For instance, candidates of putatively misplaced SNPs were identified if recombination rate between close SNPs was unusually high. Since the bovine genome assembly has been updated to its current version ARS-UCD1.2, it was necessary to re-analyse the data. The parameter estimates as well as the input data are now jointly available from this repository. More details about the methodology can be found in Hampel et al. (2018, Fron Genet), https://doi.org/10.3389/fgene.2018.00186.
Keywords:
SNP, recombination rate, linkage disequilibrium
Related information:
-
Language:
-
Publishers:
Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196 Dummerstorf, Germany
Production year:
Subject areas:
Agriculture
Biology
Life Science
Genetics
Resource type:
(Dataset) genotypic data
Data source:
-
Software used:
-
Data processing:
-
Publication year:
Rights holders:
Leibniz Institute for Farm Animal Biology (FBN), Wilhelm-Stahl-Allee 2, 18196 Dummerstorf, Germany
Funding:
Federal Ministry of Education and Research (BMBF)
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Archiving date:
2020-02-05
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1.4 GB
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radarfbn
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da316310f2e6307e9b9c7c02dbd1cb09 (MD5)
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