Alternate identifier:
-
Related identifier:
-
Creator/Author:
Katzke, Julian https://orcid.org/0000-0002-1447-9660 [Katzke, Julian]

Hita Garcia, Francisco https://orcid.org/0000-0003-4709-3083 [Hita Garcia, Francisco]

Lösel, Philipp D. https://orcid.org/0000-0003-0506-1171 [Lösel, Philipp D.]

Faragó, Tomáš https://orcid.org/0009-0006-9824-2797 [Faragó, Tomáš]

Economo, Evan P. https://orcid.org/0000-0001-7402-0432 [Economo, Evan P.]

van de Kamp, Thomas https://orcid.org/0000-0001-7390-1318 [van de Kamp, Thomas]

Azuma, Fumika https://orcid.org/0000-0002-5275-8775 [Azuma, Fumika]

Zuber, Marcus https://orcid.org/0000-0002-2429-6171 [Zuber, Marcus]

Hamann, Elias https://orcid.org/0000-0002-0623-9069 [Hamann, Elias]

Sarkar, Chandan https://orcid.org/0009-0001-4374-0231 [Sarkar, Chandan]
Contributors:
-
Title:
CASENT0745211-Colobopsis.truncata
Additional titles:
-
Description:
(Technical Remarks) Processed micro-tomographic scan of the ant Colobopsis truncata, scanned at KIT Light Source. This dataset is part of the open-source digitization project ‘Antscan’, with a database consisting of thousands of scanned ethanol-preserved ant ...
Keywords:
colobopsis truncata
antscan
ant
synchrotron
micro-CT
biology
biodiversity
digitization
tomography
insect
formicidae
anatomy
Related information:
(Domain-specific Metadata) specimen_code = CASENT0745211, collection_code = ANTC39540, taxon_code = Colobopsis.truncata, lifestagesex_original_col = w, subcaste_original_col = not_available, caste = worker, caste_detail = not_available, genome_associated = not_available, LTS_Box = LTS OIST 03, for_more_specimen = OIST 03, specimens_left = 1w, scanning_vial_box = ANTSCAN_XS_40, problems_det = not_available, problems_other = not_available, stained = iodine, scan_tray = tray_32, magnification = 5x_2steps, voxel_size = 2.44 µm, filter = 500 µm Al, projections = 3000, fps = 70.0, exposure_time_per_frame = 0.01 s, Genus = Colobopsis, Species = truncata, Status = valid, Name = Colobopsis truncata, Family_or_other = Formicidae, Subfamily = Formicinae, Tribe = Camponotini, Genus_authority = Mayr, 1861, Source = https://www.antwiki.org/wiki/Colobopsis, specimen_id = 51609.0, located_at = OIST, owned_by = FHGC, antscan_contributor = Enrico Schifani, determined_by = E. Schifani, insert_user_23 = fgarcia, collected_by = E. Schifani, method = not_available, sampling_effort = not_available, date_collected_start = 2017-08-09, date_collected_end = not_available, habitat = mixed forest habitat, microhabitat = not_available, behavior = not_available, disturbance_level = not_available, country = Italy, adm1 = Emilia-Romagna, adm2 = not_available, island_group = not_available, island = not_available, locality_name = Parma, latitude = 44.768247, longitude = 10.315329, latlong_error = not_available, elevation = 77.0, elevation_error = not_available, biogeographic_region = Palearctic
Language:
English
Production year:
Subject areas:
Biology
Resource type:
(Image) Dataset
Data source:
(Organism) Ant Specimen
Software used:
Resource processing
Software:
Python - 3.10.12
Concert - 0.31.0
ufo-core - 0.16
ufo-filters - 0.16
tofu - 0.9
Fiji - 2.15.1
numpy - 1.24.3
SimpleITK - 2.3.1
SciPy - 1.11.4
Biomedisa - 23.09.1
Alternative software:
-
Data processing:
Tomographic data acquisition
Reconstruction of absorption and phase contrast 32-bit tomograms
Blending of both reconstructions
8-bit conversion
Stitching of height steps
Cropping
Publication year:
Funding:
BMBF (05K2019 & 05K2022)
DFG (INST 35/1503-1 FUGG)
Name Storage Metadata Upload Action
Status:
Published
Uploaded by:
radarips
Created on:
Archiving date:
2025-05-08
Archive size:
897.1 MB
Archive creator:
radarips
Archive checksum:
ce955b27a7896cf3c56cbe245cf98719 (MD5)
Embargo period:
-